Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIELDINASDKSLSHRAVIFSLLAQKPCFVRNFLMGEDCLSSLEIAQNLGAKVENTAKNSFKITPP---TTIKEPNKILNCNNSGTSMRLYSGLLSAQKGLFVLSGDNSLNARPMKRIIEPLKAFGAKILGREDNHFAPLAIVGGP-LKACDYESPIASAQVKSAFILSALQAQGISAYKESELSRNHTEIMLKSLGANIQNQDGVLKISPLEKPLESFDFTIANDPSSAFFLALACAITPKSRLLLKNVLLNPTRIEAFEVLKKMGAHIEYV-IQSKDLEVIGDIYIEHAPLKAISIDQNIASL-IDEIPALSIAMLFAKGKSMVRNAKDLRAKESDRIKAVVSNFKALGIECEEFEDGFYIEGLGDASQLKQHFSKIKPPIIKSFNDHRIAMSFAVL-TLAL-PLEIDNLECANISFPTF-----QLWLNLFKKRSLNGN |
3SLH Chain:A ((22-438)) | --------GDKSISHRAVLLAAIAEGQTQVDGFLMGADNLAMVSALQQMGASIQVIEDENILVVEGVGMTGLQAPPEALDCGNSGTAIRLLSGLLAGQPFNTVLTGDSSLQRRPMKRIIDPLTLMGAKI--DSTGNVPPLKIYGNPRLTGIHYQLPMASAQVKSCLLLAGLYARGKTCITEPAPSRDHTERLLKHFHYTLQKDKQSICVSGGGK-LKANDISIPGDISSAAFFIVAATITPGSAIRLCRVGVNPTRLGVINLLKMMGADIEVTHYTEKNEEPTADITVRHARLKGIDIPPDQVPLTIDEFPVLLIAAAVAQGKTVLRDAAELRVKETDRIAAMVDGLQKLGIAAESLPDGVIIQG-----------GTLEGGEVNSYDDHRIAMAFAVAGTLAKGPVRIRNCDNVKTSFPNFVELANEVGMNVKGVRGR--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SLH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -258562 for 3776 contacts (-68.5/contact) +
2D Compatibility (PS) -42617 + (NN) -8010 + (LL) 1116
1D Compatibility (HY) -30400 + (ID) 8550
Total energy: -347023.0 ( -91.90 by residue)
QMean score : 0.471
|
|
|