Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLEQAFLKIIEKKHKELNLGQDYNAIFSKIRDFEANAIGQI--GEEFLKSVLNAIDEVINDGIIHDE--YDIMTKSGVSFEVKTAQKGRTNNTFQFNGINPRYNYDFLI---CLGVCEDQLLYRIFKKDEIHYIHKERKYFMKQNEFKKQLVPMNPDNQVNDKLTLNLKELKEITNLIKELERILELD |
| 2GCD Chain:A ((6-105)) | ----------------ELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK------EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13068 for 545 contacts (-24.0/contact) +
2D Compatibility (PS) -9676 + (NN) 707 + (LL) 1956
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: -26781.0 ( -49.14 by residue)
QMean score : 0.231
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