Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGL----EVAPRQ--IECVEVLRCEDFESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDFVQMTNNHWTFSIETTRQCLNLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSDGSLKVLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGDYPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVMKKTPGLDGAGIALENYLLHDRI |
| 3VPZ Chain:A ((10-327)) | -------PILVADIGGTNARFALITAFDAAKNEFVIEYNHTFPSADFGSLQNATRHYLSTVPH---IKPVRACLAVAGPIKAGQVHLTNLGWHFSVSEFKQAFSFLQLEVINDFAAFAYAAPYLDSNQNVVIKAGQADENSNIAVMGPGTGFGAACLVRTAQSS-AVLSSEGGHISLAAVTDLDAKLLIELRKEHPHVSLETVFSGPGIAHLYKAMAAVNG------ITAKHLDAAQISNLANTGECEVCDATLNQFCDWLGSAAGDLALAYGALGGLFIGGGILPRMQSRLLESRFVERFSQKGIMSQYNGQVPVTLVTQDNIPLIGAAACLHNS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257479 for 2675 contacts (-96.3/contact) +
2D Compatibility (PS) -32709 + (NN) -2554 + (LL) 2076
1D Compatibility (HY) -19600 + (ID) 6050
Total energy: -316316.0 ( -118.25 by residue)
QMean score : 0.477
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