Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIFLKKSLCALLISGFFIPPLMKAASFVYDLKFMSFNFNLASPPNNPYWNSLTKMQGRLMPQIGVQLDKRQALMFGAWFIQNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLGIVPRSYQIGHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRWWNGWFEGVVDWYGGRNWNNQPKKKNYDFDQFLYFVSSEFQFLKGYLGLGGQLVIFHNANSHSMGDNYPYGGNSYLKPGDATPQWPNGYPYFSQKDNPQGGEIGKYSNP--TILDRVYYHAYLKADFKN--LMPYMDNIFMTFGTQSS--QTHYCVRYASECKNARFYNSFGGEFYAQAQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGLPWYRAPNFDMIGLYYLYKN--KWLSVRADAFFSF-VGGGDGYHLYGKGGKWFVMYQQFLTLTIDTRELIDFVKSKIPK |
2FO0 Chain:A ((73-263)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGEWCEAQTKNGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR----FNTL----AELVHHHSTVADGLITTL-HYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67589 for 1084 contacts (-62.4/contact) +
2D Compatibility (PS) -18841 + (NN) -1154 + (LL) 12516
1D Compatibility (HY) -2400 + (ID) 2400
Total energy: -79868.0 ( -73.68 by residue)
QMean score : 0.037
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