Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDKRIKTLLLFFGLNMVCLSVSFTNKPHLCFWFLVLGCYLVYEWQKKQKKDFQSAKSLKFDSVSELEKDLNMEVTNDEWDTIKKLNEKLKMFFNVENAIYVFLLVSYLIVGMRVTLSLIDNHGVLK |
3SMZ Chain:A ((125-157)) | --------------------------------------CFLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFNDVDALCRALSAVHSPT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2797 for 134 contacts (20.9/contact) +
2D Compatibility (PS) -3394 + (NN) 188 + (LL) 3372
1D Compatibility (HY) -1600 + (ID) 600
Total energy: 763.0 ( 5.69 by residue)
QMean score : 0.020
|
|
|