Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRSSVFSFLVAFLLVVGCSHKMDNKTVAGDVSTKAVQTAPVTTEPAPEKEEPKQEPAPVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTISFGESKPKCVQKTRECYRENRRVDVKLVK |
1OAP Chain:A ((7-104)) | ---------------------------------------------------------------------------VYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2151 for 682 contacts (3.2/contact) +
2D Compatibility (PS) -10365 + (NN) -4965 + (LL) 5248
1D Compatibility (HY) -4400 + (ID) 1900
Total energy: -14231.0 ( -20.87 by residue)
QMean score : 0.441
|
|
|