Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFHEFRDEISVLKANNPHFDKIFEKHNQLDD------DIK--TAEQQNASDAEISHMKKQKLKLKDEIHSMIIEYREKQKSERA
2ZKX Chain:A ((53-105))
-VHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKG
General information:
TITO was launched using:
RESULT:
Template:
2ZKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4386 for 168 contacts (26.1/contact) +
2D Compatibility (PS) -4278 + (NN) 2911 + (LL) 208
1D Compatibility (HY) -1200 + (ID) 750
Total energy: 1277.0 ( 7.60 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_2ZKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZKX-query.scw
PDB file :
Tito_Scwrl_2ZKX.pdb
: