Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDILNALYHQKDLNDEEVKKLFTLIIDEKVSPAQLGAVLCALKIKGESFKEISVAATTLLEHAPKPFNSGLD-LIDNCGTGGDGLKTINISTIAALIASSMGLSMAKHGSRSVSSHSGSADLLENLGVNIEMNPMQLENCFKQSHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGPLINPLRPKIQLLGVYDKSLCKTMALALKALGVKRAMVVNG-GGTDEIVLHDITHACELKNNEILEYDLSAKDFDLPPYDLKELQIENAKESVQACLDILENKGKD---SHTMVVAANVASLLYLSHRAKDLKEGVSMTLEHLKTKAPYAHLQKIIRLSHA |
| 4YI7 Chain:A ((19-335)) | IQQALNHITKNIHLTQAQMEDVMRSIMQGEATEAQIGALMMGLRMKGESIDEITAAARVMRELAIKIDVSDIQYLVDIVGTGGD--NLFNVSTASSFVIAAAGATIAKHGNR-------SSDLLEQAGINLDLDMQQTERCIREMGVGFLFA------MKYAVGPRRELGIRSIFNLLGPLTNPAGVKRFVIGVFSDELCRPIAEVMKQLGAEHVMVVHSKDGLDEISLASQTYIAELKNGEVTEWVLNPEDVNIPSQTLSGLIVEDSNASLKLIKDALGRKKSDIGEKAANMIALNAGAGIYVSGLATSYKQGVALAHDIIYGGQALEKMSILSEFTKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210549 for 2571 contacts (-81.9/contact) +
2D Compatibility (PS) -31394 + (NN) -12604 + (LL) 220
1D Compatibility (HY) -19600 + (ID) 5400
Total energy: -279327.0 ( -108.65 by residue)
QMean score : 0.566
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