Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNKKSNHLRAIYRALVIAIGLAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNLEKIGSFDTGAKLIVLNHQSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLINSIKIFNSKPLEAYKARTRLVMLESY-----TPDFSSPTWYEELQERMQKEYLKHYHELNA |
| 4R9U Chain:C ((58-92)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAGQPLEAWSA-TKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4R9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -701 for 105 contacts (-6.7/contact) +
2D Compatibility (PS) -3212 + (NN) -1822 + (LL) 13652
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 5217.0 ( 49.69 by residue)
QMean score : 0.016
|
|
|