Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYLYSKRLRELEGRLEGLSLEKSAKEDSSLKTTLSHLYNQLQEIQKSMDKER-DYLEEKIITLENKFKDMGHYAASDEVNEKQVLKMYQEGYSVDSISKEFKVSKGEVEFILNMAGLKW |
2GOL Chain:A ((55-108)) | ------------------------------------------------------SEGCRQILGQLQ-PSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEE------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GOL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8302 for 315 contacts (26.4/contact) +
2D Compatibility (PS) -5608 + (NN) -2023 + (LL) 9840
1D Compatibility (HY) -2400 + (ID) 950
Total energy: 7161.0 ( 22.73 by residue)
QMean score : 0.345
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