Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLQTHRVLQALIGHFTPFLE-SGITELIINTEQELWLYKINNTREKRGHVLFDKAF----LLRFCEQLASFRGLFFDE-EHPTLNCSIPFTRYRVSANHFSITTNNQ-ITLNIRVPR--LKPLSL---EDFTFKVSNPE----SLKNLALKGHNILISGETSSGKTSLLNALLDCVNKDERVVSVEDSQELDLKAFSNCVGLLVGKQENTRFNYEDALNMAMRLNPDRLIVGEIDTRNAALFLRLGNTGHKGMLSTIHANSAQNTLEALSLNLSMRYTHSLDK-DLMRAYFKSAIDVIVHVNKINNERQIAEVLWTKEL |
| 1NLY Chain:A ((36-317)) | ----------------FGDFLKMENITEICYNGNKVVWVLK-NNGEWQPFDVRDRKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLA-NGERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGN----ITSADCLKSCLRMRPDRIILGELRSSEAYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156477 for 1988 contacts (-78.7/contact) +
2D Compatibility (PS) -28800 + (NN) -17503 + (LL) 2564
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -222616.0 ( -111.98 by residue)
QMean score : 0.465
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