Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQNPIEIKAKTLEEALIQASIALNCPIINLQYEVIQMPSKGFLNIGKKEAIILVGVKESVKEVKEESVKEIHQ-----------NAEEKQSLGIKTPQEEIITPKP---PKKTPKEESHNGDKLHEIKQE--LKDLFSHLPYKI-NKV-EVSLYEPGVLLIDI-----DGEDSALLIGEKGYRYKALSYLLFNWIHPAYGYSIHLEIST-----FLQNQEKVMEAQLQSTIMTVHEVGKGQMKAPDGVLTYIALKKLRKAFPNKYVSIKTNLNDEKYIVINDFNNE |
1WF3 Chain:A ((120-298)) | --------------------------------------------------ILLVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPEDYAKSDQTFGEWVAEILREEAMKRLWHEVPYAVATKVEEVAERENGVLYIKAILYVERPSQKAIVIGEGGRKIKEIGQATRKQLEALLGKKVYLDLEVKVYPDWRKDPEALRELGYRS--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34750 for 804 contacts (-43.2/contact) +
2D Compatibility (PS) -16320 + (NN) -4935 + (LL) 8188
1D Compatibility (HY) -8800 + (ID) 2150
Total energy: -58767.0 ( -73.09 by residue)
QMean score : 0.385
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