Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEKIRKILADIEDSQNEIEMLLKLANLSLG-------DFIEIKRGSMDMPKGVNEAFFTQLSEEVERLKELINALNKIKKGLLVF
3J95 Chain:A ((305-371))
----IRKLFADAEEEQRRLG-----ANSGLHIIIFDEIDAIC------------HDTVVNQLLSKIDGVEQLNNIL----------
General information:
TITO was launched using:
RESULT:
Template:
3J95.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3253 for 241 contacts (13.5/contact) +
2D Compatibility (PS) -4773 + (NN) 2027 + (LL) 2580
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -1363.0 ( -5.66 by residue)
QMean score : 0.120
(partial model without unconserved sides chains):
PDB file :
Tito_3J95.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J95-query.scw
PDB file :
Tito_Scwrl_3J95.pdb
: