Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVILENVTQMS-QVPLDVHLMVENASFFVELFAPLNPQIISIHAENEKHPHRVLQLIKSSGITPGIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKNIFELQQAGVDVVVSGSYIFESKDRKLAIEGLQNVRQPLA
3INP Chain:A ((28-241))
IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGF--QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELNKV-
General information:
TITO was launched using:
RESULT:
Template:
3INP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160344 for 1751 contacts (-91.6/contact) +
2D Compatibility (PS) -22903 + (NN) -12687 + (LL) -152
1D Compatibility (HY) -19600 + (ID) 4500
Total energy: -220186.0 ( -125.75 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3INP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3INP-query.scw
PDB file :
Tito_Scwrl_3INP.pdb
: