Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESVETNKNLPIEYRSEQGRLNILGFWIFLGAEIALFATLF------ATYFVMRKAGSNAGHPPAE---MFELW-LVLIMTFLLLTSSFTCGLAIGE-MRKGNVKMLTIYSIITLILGAGFVGFELYEFAHYVTEGVTMQVGSYWSAFFVLLGTHGLHVTVGIFWISFILIQIKMHGLTPKTASKVFISSLYWHFLDVVWIFIFTGVYLLGMVN
1QLE Chain:C ((74-272))
----ETGEHTPVVRIGLQ-----YGFILFIMSEVMFFVAWFWAFIKNALYPMGPDSPIKDGVWPPEGIVTFDPWHLPLINTLILLLSGVAVTWAHHAFVLEGDRKTTINGLIVAVILGVCFTGLQAYEYSH-AAFGLADTV--YAGAFYMATGFHGAHVIIGTIFLFVCLIRLLKGQMTQKQHVGFEAAAWYWHFVDVVWLFLFVVIYIWG---
General information:
TITO was launched using:
RESULT:
Template:
1QLE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175819 for 1311 contacts (-134.1/contact) +
2D Compatibility (PS) -18881 + (NN) 179 + (LL) 916
1D Compatibility (HY) -17600 + (ID) 3150
Total energy: -214355.0 ( -163.50 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_1QLE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QLE-query.scw
PDB file :
Tito_Scwrl_1QLE.pdb
: