Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTFFSKWGKWILVLGLVFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYVKAATATPTPKPPTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKSNPNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAWVSKFHGFSVHAITITGYDKNNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY |
| 2KT8 Chain:A ((1-62)) | ------------------------------AEKTGIVN----VSSSLNVREGASTSSKVIGSLSGNTKVTIVGE-EGAFYKIEYKGSHGYVAKEYIK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8731 for 389 contacts (-22.4/contact) +
2D Compatibility (PS) -6568 + (NN) 141 + (LL) 12312
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -10596.0 ( -27.24 by residue)
QMean score : 0.376
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