Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDYIIAAHGRYAQEVKDSCQMITGQTTNISAITFTEEMGVTDVLDAYMAVYSPVNETAIIVDIVGGTPCNAAQMFSTKH--PEVKVVSGLSLGLIIPLSLGESLEEAMLGAKDNIQFVEQKASHTIVSDDGEEED
4TKZ Chain:A ((5-107))
---IIVAHGNFPDGILSSLELIAGHQEYVVGINFIAGMSSNDVRVALQREVIDFKEILVLTDLLGGTPFNVSSALSVEYTDKKIKVLSGLNLSMLMEAVLSRTMFE-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
4TKZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86451 for 728 contacts (-118.8/contact) +
2D Compatibility (PS) -11009 + (NN) -1936 + (LL) 2028
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -108468.0 ( -148.99 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_4TKZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TKZ-query.scw
PDB file :
Tito_Scwrl_4TKZ.pdb
: