Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNEMEKVALKTAVPAGVKLSILTVKGAANNINNDKYAGQQVFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLAQKGIKITAQMVPSEDAVEFANLLKK
1NRZ Chain:A ((7-156))
---------RIDDRLIHGQVTTVWSKVANAQRIIICNDDVFNDEVRRTLLRQAAPPGMKVNVVSLEKAVAVYHNPQYQDETVFYLFTNPHDVLTMVRQGVQIATLNIGGMAWRPGKKQLTKAVSLDPQDIQAFRELDKLGVKLDLRVVASDPSV---NILDK
General information:
TITO was launched using:
RESULT:
Template:
1NRZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96884 for 1111 contacts (-87.2/contact) +
2D Compatibility (PS) -16374 + (NN) -5588 + (LL) 640
1D Compatibility (HY) -17200 + (ID) 2550
Total energy: -137956.0 ( -124.17 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_1NRZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NRZ-query.scw
PDB file :
Tito_Scwrl_1NRZ.pdb
: