Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLAIWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMGDMVLGLAIGATLQLM----VLGVGTYGGASIPDFTTGAIVGTVFAVLSGQDAEFAIGLA-IPVGLLMVQLDILARFTNTFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLTFGQSVVDFILNEIPEWLMGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIYFKQNFKNPVAAGANGAALVGEENEDGEYED |
4S2A Chain:A ((141-278)) | --------------------------------------AGIITAEMEY-VAIRENLRREQDRPCVRDGEDFGASIPDFVTPEFVRQ----------EIARGRAIIPANINHGELEPMAIGRN--FLVKINANIGN---STVADEV--DKLVWATRWGADTVMDLSTGRNI-----HNIRDWIIRNSSVPIGTVPI----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96173 for 844 contacts (-113.9/contact) +
2D Compatibility (PS) -12869 + (NN) 2910 + (LL) 12308
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -102424.0 ( -121.36 by residue)
QMean score : 0.126
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