Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMANTKTEQDFEKVLKRRDL--IAANFRWLFASQICWNYERMMSTGYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNTNPMVGGLILGMDMAIEEREKKASKEVVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAYMGLQGNVTGVVIWVLVNILVVGARFTLLPLGYKQGAKLVTEFADRLNALTDAAILLGVTVVGALIPTVIKATVPFVYKSGKVELKMQDMLDQIMPSLVPVLLVALIYALLGHKKMTSTKAILLVMVIAIILFNLKILG |
1I1E Chain:A ((796-856)) | ----------DFDNTLKKNLLNYIDENKLYLIGSA---EYEKSKVNKYLKTIMPFDLSIYTNDTILIEMFNKYN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I1E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7732 for 282 contacts (27.4/contact) +
2D Compatibility (PS) -6240 + (NN) -2108 + (LL) 18728
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: 13062.0 ( 46.32 by residue)
QMean score : -0.069
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