Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVKGDTVGIICCSDGRKKEDENRIALLEQVLKTEFSLQVVFAETIFQKAESPFSGTPQARAIELMKLYQRSDVQMIFDISGGDAANQVLPYLDFDIIRNAQKPFVGYSDLTVILNAIYTKT-----------EQMG---------YNY---QLLHLVGKDSELQQSHFRKTFFENRVLISGE-QLNEFVW-------RGGEVIGGNIRCFLKLAGTNFMPDFT-NKIILLESLGGKEAKLASYVAQLEQLGAFSKCLGVIVGQHSEAEENGEYERIGRLYQQIGRKYKLPIFRTSEIGHSVDAKPCLIGAKVNVSRETLTNF |
| 3U1B Chain:A ((61-321)) | ------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNPKIMIGYSDATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDEFINWEEKTKEKELRPNNWISVTNGQATGRVIGGNLNTIQGIWGSPYMPCIQEGDILFIEDSRKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCHTHPMITMPIGVQVKM-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90883 for 1708 contacts (-53.2/contact) +
2D Compatibility (PS) -24284 + (NN) -5442 + (LL) 5056
1D Compatibility (HY) -14400 + (ID) 3450
Total energy: -133403.0 ( -78.10 by residue)
QMean score : 0.396
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