Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTKATETLLKVLADYTQ-NIGFIAPKQTGIGVGLVGRVDHKSGVWLEIEP---GKSNPTPLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETNDFIYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEALRHLNSYPTSILAETQTELTG---KMVLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRNEHFFQKIQDNLQSNTIRFVTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE |
| 2AA4 Chain:A ((2-264)) | -----TTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGI---------IRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDG-DITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPV-CGCGRTGCVEAIASGRGIA---------------AAAQGELAGADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAF---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2AA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -108063 for 2081 contacts (-51.9/contact) +
2D Compatibility (PS) -28233 + (NN) -18935 + (LL) 4048
1D Compatibility (HY) -10400 + (ID) 4500
Total energy: -166083.0 ( -79.81 by residue)
QMean score : 0.497
|
|
|