Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKHAATTFTIHDKETDKVVFTGKS---YQNATETGNFVILDFSDLQTVGEYYLKFADMQTEI-FQIGTSEVIWESSIWKSLNFIFCERCGCPVFG-------KHTTCHAD------IIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALY-----------EMAASLPEKEETLRMRLLEEGEWGLDFILKTRFGDGFRATSAGMTRWTDGLVGGMDDAIARVHNQAYENFYCAGIEAYIGSQIADNATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
4CJ0 Chain:A ((58-239)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEDGTIVYTGTATSMFDNDTKETVY-IADFSSVNEEGTYYLAVPGVGKSVNFKIAMN--VYEDAFKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDST--KGWHDAGDYNKYVVNAGITVGSMFLAWEHFKDQLEPVALEIPEKNNSIP-DFLDELKYEIDWILTMQYPDG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CJ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27369 for 841 contacts (-32.5/contact) +
2D Compatibility (PS) -16225 + (NN) -3437 + (LL) 43856
1D Compatibility (HY) -13600 + (ID) 2300
Total energy: -19075.0 ( -22.68 by residue)
QMean score : 0.121
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