Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVN-RTFTNQQGER-EADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNNDPFASDGKPIDISDDDLPF
1X3F Chain:A ((7-106))
----ITVVGNLTADPELRFTPSGAAVANFTVASTPR---------GEALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSFETREGEKRTVVEVEVDEI------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X3F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54167 for 568 contacts (-95.4/contact) +
2D Compatibility (PS) -9471 + (NN) -1985 + (LL) -512
1D Compatibility (HY) -5200 + (ID) 2050
Total energy: -73385.0 ( -129.20 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_1X3F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X3F-query.scw
PDB file :
Tito_Scwrl_1X3F.pdb
: