Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYKIVALLMLLCFAFAPGVLAADSDSYLENNGKMDIKTDRLQKTEEEKTKELEQMEETELDKNGIPLFTDEMDEKIAKEKAAEKAEYDRIKDSLFEEESTSGETVKKTKEKLFTGEYETTAVNTETPTTTETTVEDETKKTKQKTVGGAIAGTLVALAGGIYVAARNVFE |
| 4PD3 Chain:A ((974-1003)) | ----------------------------------------------------------TELNYNGVPELTERKDTFFAQQWTGVKSSA----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4058 for 112 contacts (36.2/contact) +
2D Compatibility (PS) -3388 + (NN) -1240 + (LL) 10488
1D Compatibility (HY) -400 + (ID) 500
Total energy: 9018.0 ( 80.52 by residue)
QMean score : 0.637
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