Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVETIDVFSPVELYLLLSPIEAQHLFGVPDKLTFLLKGEDVFAEGFDRLKSKGILNEAGELTDGGGFLIDSLIEYYQSKKYVRMNQLMFAFLEKTPNELLVMIEITPQKEYRFERMNKI--YALEMIKDFFPLIRREPGERETEFLKEELTNEERKRATAFDPEKNFISMEFFHVDEEPKEKNNAKYYKQYLAFEMEDKLMMVDVVNDTYYRGSQYALLKLLFDELEFPYEEAK |
5A2Q Chain:R ((38-104)) | -------------------------------------------------------------------------------------------------------IAIIPSKKLR----NKIAGYVTHLMKR----IQRGP----VRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKE----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11821 for 250 contacts (47.3/contact) +
2D Compatibility (PS) -7006 + (NN) -3440 + (LL) 13312
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: 9037.0 ( 36.15 by residue)
QMean score : 0.258
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