Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDREYLKQNPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLIS-GYDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKNGVSVFECGGKDNFDNGNGAIMRIMPLVFYLGKDFSFGKKNKITEEVTRITHAHPRSILGSYVYIELLQNLFANMDKK--LAYEEMQNYIRKNYSDYPFK--DELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
| 2YZW Chain:A ((8-290)) | -----------------QDRRLGAFLGLAVGDALGAQVEGLPKGTFPE--VREMKGGGPHRLPPGFWTDDTSQALCLAESLLQRGFDPKDQMDRYLRWYREGY------------ATRRALERY---AATGDPYAGDEAGAGNGPLMRLAPLVLAYENHPDL---LSLARRAARTTHGAREALEATEVLAWLLREALRGAPKEALLALE-------------PFRGADLHPALRRVVEGGFWEAPE---EGPGYAPGTLAAALWAFARGRDFEEGMRLAVNLGGDADTVGAVYGQLAGAYYGLGAIPGRWLRALHLREEMEALA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168839 for 2494 contacts (-67.7/contact) +
2D Compatibility (PS) -27510 + (NN) -2616 + (LL) 3592
1D Compatibility (HY) -9600 + (ID) 4300
Total energy: -209273.0 ( -83.91 by residue)
QMean score : 0.453
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