Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDELKKYK-KIIEDAVDLLGYTPLRYAIFEGEKNNRIEYQVRIEYIENHYEVYTTGERASISGKKQFENFFEAYHNFLFKLQLSILQNRRRVRDGEPPEYFCALWEK
4GZE Chain:A ((402-425))
LTDHLRQIKLAVLEDGVDLIGYTP------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4GZE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1828 for 86 contacts (-21.3/contact) +
2D Compatibility (PS) -2352 + (NN) -716 + (LL) 6644
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -2052.0 ( -23.86 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_4GZE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GZE-query.scw
PDB file :
Tito_Scwrl_4GZE.pdb
: