Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSSYAIAESLGAVDGEHLTFDEMFSVISRIAENVSLPLTVDIETGYARNLEELAQNVERLLAIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIKTIKETAAKMSTEIFINARTDVFFQGRDEAVDLVEEAISRANAYKEAGADAIFIPGLLSPNLIRAFVEKSPLPVNVMR--MDGMLSNE--DLQKIGVKRISYGPFSFFQANLAIQQEVERIFEGGKAL
2QIW Chain:A ((11-244))
------KFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSPADL---IAQILEAGAVGINVED-VVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGP--LWQKWLA---------------
General information:
TITO was launched using:
RESULT:
Template:
2QIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158177 for 2012 contacts (-78.6/contact) +
2D Compatibility (PS) -25256 + (NN) -12008 + (LL) 2272
1D Compatibility (HY) -12800 + (ID) 3550
Total energy: -209519.0 ( -104.13 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_2QIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIW-query.scw
PDB file :
Tito_Scwrl_2QIW.pdb
: