Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDKDFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLETEIKKLRMRLNAAITPEKTIIIQQIEAELAQYFNGELIDFKTPIRYIGSDFQENVWEELRRIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK |
| 1SFE Chain:A ((12-173)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAVRY-ALADCELGRCLVAESERGICAILLGDDDA--TLISELQQMFPAADNAPADLMFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGSLSGYRWGVSRKAQLLRRE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78581 for 1251 contacts (-62.8/contact) +
2D Compatibility (PS) -17780 + (NN) -6854 + (LL) 10552
1D Compatibility (HY) -12800 + (ID) 2850
Total energy: -108313.0 ( -86.58 by residue)
QMean score : 0.668
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