Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRQLGNAGLVTSELGFGCMGLNYHR-GPAKDRNEMIEVVRTAMDAGITMFDTAEVYGPYTNEELVGEALVG-KRNHVQIATKGGFKINGLNNEVDSRPESIKAAVEGSLKRLKTDYIDLYYIHRIDPSIPIEEVAGTIQNLKQEGKILHWGLSEASAKTIRRAHKVEPLAAVESEYSIWWREAEKEVFPVLEELGIGLVAYSPLGRGYLTGKLDINADFNANDNRGGLPRFQKEAMEANQVLLDFMKEIADEQNVTTAQLALAWILDQKPWIVPIPGTTRPSRIEENIASTEIHFDDGARQKIADALSQIEIVGDRYSAAENKRIGK |
1PZ0 Chain:A ((2-295)) | -KKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADV---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126975 for 2465 contacts (-51.5/contact) +
2D Compatibility (PS) -30959 + (NN) -12569 + (LL) 2364
1D Compatibility (HY) -17200 + (ID) 5100
Total energy: -190439.0 ( -77.26 by residue)
QMean score : 0.471
|
|
|