Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALGWANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIPLAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGVRIAIPAAALLFIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY |
4BYG Chain:A ((131-162)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIY------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26078 for 172 contacts (-151.6/contact) +
2D Compatibility (PS) -3167 + (NN) 1041 + (LL) 18472
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -13932.0 ( -81.00 by residue)
QMean score : 0.149
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