Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEKIELSKRDRLRVAWRSTFIQGSWNYERMQNGGWAFSMIPAIKKLYKTKEDRSQALKRHLEFFNTHPYIASPILGVTLALEEERANGAEVDDVAIQGVKVGMMGPLAGVGDPVFWFTIRP-MLGALGASLALSGNILGPILFFVAWNVIRWGFMWYTQEFGYKAGSKITDDLSGGLLQDITKGASILGMFVLAALVQRWVNIQFAPIISKVKLDEGAYIDWSHLPQGAQGIKTALEQQQAGLALSEIKVTTLQNNLDNLIPGLAAVALTFLCMWLLKKKISPIIIILGLFVVGIVGHLIGLL |
3ME1 Chain:A ((42-137)) | ---------------------------------------------------------------FYNSTTLGVCAVLGTAASTLTAQLLG--VDKPLVRAGLFGFNGTLAGIALP-FFFNYEPAMLGYVALNGAFTTIIMASLLNFLG----KWGVPALTAPF---------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ME1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38293 for 670 contacts (-57.2/contact) +
2D Compatibility (PS) -9059 + (NN) 4572 + (LL) 17492
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -33838.0 ( -50.50 by residue)
QMean score : 0.080
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