Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTA-KSAEELVAQMVEKWR-------PYRTEVKGIAVSCPGVVDTEKGVIYQGGSLLFMHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETS---FD-TKKLRGTFFGRTGSAVELIKRIAS------------KKNLPNKKD--GEHVFELINQGDEEANAIFDAYIYELASQILNIQYLIDPEIIAIGGGISAQPVVVERLNDAVAEIKAANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR |
| 2QM1 Chain:A ((12-274)) | -----DLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCL--ETVSSATGVVRVARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSA-------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -127586 for 1797 contacts (-71.0/contact) +
2D Compatibility (PS) -25706 + (NN) -11859 + (LL) 5020
1D Compatibility (HY) -12800 + (ID) 4050
Total energy: -176981.0 ( -98.49 by residue)
QMean score : 0.477
|
|
|