Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKSLSFMRVLEAVRTMLQEKGGLDISIVMRDQVEMPTTMIEMIDQEEEESQTAWKEKYRFAIHHYTNETDLAGVEKIDTLIQTGFTLPEGYKLIAVRHYGKQNLVKENTLIHAKTSFEVSICRELKVKI |
4J7M Chain:A ((239-293)) | --------------------------------TQPPSCYVELKTSKEMHSPGQWRSFYRHKLLKWWAQSFLPGVPH----VVAGFRNPEGF-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J7M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6238 for 277 contacts (22.5/contact) +
2D Compatibility (PS) -5771 + (NN) -931 + (LL) 7160
1D Compatibility (HY) -2800 + (ID) 750
Total energy: 3146.0 ( 11.36 by residue)
QMean score : 0.075
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