Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQGLTVNRSKDSIEITSKDTVGGWKSKIGGMKEWSIENDGLYVAD-AESHKELAKYFESDSPVCVKIINQASKKGLFGGLAIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQMPGETPVAPAE |
5RUB Chain:A ((412-439)) | ------------------------------------------------------------------------QAWQAWRDGVPVLDYAREHKELARAFES----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5RUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 343 for 134 contacts (2.6/contact) +
2D Compatibility (PS) -3018 + (NN) -1525 + (LL) 8012
1D Compatibility (HY) -800 + (ID) 700
Total energy: 2312.0 ( 17.25 by residue)
QMean score : 0.257
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