Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VDSEMNHDFDLEKQFAFFVVNFRMSKHDFEE----------LTEVEKNFIMKEWENKVIFESTMLRNAVLNAEQNLNRKRNSRFIDLHKKRQKKADVNYTVNALQAISENEAKEGKAWIDRIYGANGLRRPKNKEERRNVNGGF |
3VU1 Chain:A ((381-469)) | VDKEYTADLYLRATFIYLVRKGGKSNEDYDASFEPHMDTFFITKLKEGIKLRPGENEIVVNAEMPKNAISSYKEKLEKEHGDKLI----------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -348 for 353 contacts (-1.0/contact) +
2D Compatibility (PS) -7737 + (NN) 3104 + (LL) 3204
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -8227.0 ( -23.31 by residue)
QMean score : 0.190
|
|
|