Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEIKRMLQTKEDNSKEQFYPETHVAGIVGLTEYVSGQLPTGVVSVNGKAGRVLLDAEDVHAAKKSHTHEVATYTTDGFMSSFDKQKIDQLVSPEAGVT-SINGKTGIVDLFASDLDAAEINHTHAEATTTESGFLSIDDKEKLDAIQVIALETIKEVIE |
3WFJ Chain:A ((114-243)) | ----------------EKFVPMENI--YIGNTMWTAGLEGPGQVKLFG-SGSVEL--QNLGDGKEAAAKKLADKLSESGLNAHFSDNIHYSIYRKACVNGTMNGLCTILDVNMAELGKTSTAHKMVATIVNEFAKVAAVEKIELDVPEVIA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2686 for 791 contacts (3.4/contact) +
2D Compatibility (PS) -12813 + (NN) 5142 + (LL) 2644
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -8241.0 ( -10.42 by residue)
QMean score : -0.060
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