Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVILKFGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLASGYLGELSSKMGFKGIAKKIAILILVAIAHQIDLILGTHNTTRD--AVIFFYLANELISILENFVRMGMKVPEVLKNLILIFDAKSGEDEEKHDKDMD
4ZGC Chain:B ((42-83))
-----------------------------------------------------------------------------LLSGRHHVTRDKQGRIFLDRDSELFRIILNFLRNPLTIP--------------------------
General information:
TITO was launched using:
RESULT:
Template:
4ZGC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12753 for 138 contacts (-92.4/contact) +
2D Compatibility (PS) -3532 + (NN) 3645 + (LL) 8716
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -7874.0 ( -57.06 by residue)
QMean score : -0.009
(partial model without unconserved sides chains):
PDB file :
Tito_4ZGC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZGC-query.scw
PDB file :
Tito_Scwrl_4ZGC.pdb
: