Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDASGS-----PIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFD---EGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKG--TNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHV------------------------PALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTGELDKTTGDFVSPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNKAIDDKESELGNMITDAQ-----RYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQ---QYLSNQTYFLQISGLKYTFTDTDD-------LDHAYKVASVTTEDGTPLKTDQKYKVVINDFLFGGGDGFSAFKKANLVT-AIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 4H2F Chain:A ((23-542)) | -------------------------------------PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-VYKGAEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETP--FLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPS--KEVPAGKYPFIVTSDDG-----------------------RKVPVVQAYAFGKYLGYLKIEFDER-GNVISSHGNPILLDS-SIPEDPSIKADINKWRIKLDDYSTQELG---KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGGGIRSPIDER---NDGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGGIHVVYDLSRKPGDRVVKLDVLCTACAVPSYD--PLKMDEVYKVILPNFLANGGDGFQMIKDELLRHDSGDQDINVVSTYISKM----KVIYPAVEGR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4H2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102227 for 4025 contacts (-25.4/contact) +
2D Compatibility (PS) -51257 + (NN) -18641 + (LL) 10716
1D Compatibility (HY) -32800 + (ID) 7200
Total energy: -201409.0 ( -50.04 by residue)
QMean score : 0.436
|
|
|