Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYEKVEKIINDWDPIELFPLAPKDEYSQEINKIISIVQENPNIDMNVLGKGIRKIFIDSFGENLIFKNNEDEIAEKILAL
3H9R Chain:A ((254-288))
-------IVEDYKP-PFYDVVPNDPSFEDMRKVVCVDQQRPNI-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3H9R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1602 for 163 contacts (9.8/contact) +
2D Compatibility (PS) -3626 + (NN) -3554 + (LL) 3724
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -5954.0 ( -36.53 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_3H9R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H9R-query.scw
PDB file :
Tito_Scwrl_3H9R.pdb
: