Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDW--DFNNPESMKAWDLASGSYAEQVSG
3F6Y Chain:A ((136-164))
-PDWRKDCSNNPVSVFWKTVSRRFAEAACD
General information:
TITO was launched using:
RESULT:
Template:
3F6Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4311 for 106 contacts (40.7/contact) +
2D Compatibility (PS) -3096 + (NN) -2489 + (LL) 208
1D Compatibility (HY) -400 + (ID) 450
Total energy: -1916.0 ( -18.08 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_3F6Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6Y-query.scw
PDB file :
Tito_Scwrl_3F6Y.pdb
: