Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKNYYTGFEGYPEIDFYTYINGEKTGIEMWEGYFDNIMNEFSPVDGRWVS--LAYYYHLYEGW-----YDESPWVIPDNKKALEQFGTIDIKVLDNVTQEIMMKLIKLLKDNLDSEIFIEYS
3P1I Chain:A ((27-63))
---------------------------------------DEETLMDTKWVTSELAWTSHPESGWEEVSGYDEA--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3P1I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4648 for 74 contacts (-62.8/contact) +
2D Compatibility (PS) -2708 + (NN) 552 + (LL) 6280
1D Compatibility (HY) -800 + (ID) 600
Total energy: -1924.0 ( -26.00 by residue)
QMean score : -0.244
(partial model without unconserved sides chains):
PDB file :
Tito_3P1I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P1I-query.scw
PDB file :
Tito_Scwrl_3P1I.pdb
: