Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIDSIMSKYNKQQVSKIKDFLLSEIDSDNIEETIDFVKSNNQEKMGK--FQDILYDGGIYSGLFIEGNQYLISSSNRKVLIIDAVSEENGVDKELTRIECSLEDFTFLLRNIKDVLRYEEF
1IZC Chain:A ((127-191))
-----------------------------ETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESVKGVE-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7281 for 308 contacts (23.6/contact) +
2D Compatibility (PS) -6748 + (NN) -972 + (LL) 4808
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -1681.0 ( -5.46 by residue)
QMean score : -0.072
(partial model without unconserved sides chains):
PDB file :
Tito_1IZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IZC-query.scw
PDB file :
Tito_Scwrl_1IZC.pdb
: