Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKWSFLVVTVLAFVLVLAGCGASNDKVSGDKDKLKVVTTFYPMYDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMETWVPSVLKSLDSKKLTVIDASKG--IELVEGTEEEDHDHEHEEGHHHE--HDPHVWLSPVLAEQEVTNIQNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEGAKQRDFVTQHAAFQYLAKEYDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAKLEVLSPIEGITDKEQKKGMDYIAYMEQNLQALQKTIK |
3CX3 Chain:A ((12-283)) | -----------------------------------KIVTSFYPIYAMVKEVSGDLNDVRM-IQSSSGIHSFEPSANDIAAIYDADVFVYHSHTLESWAGSLDPNLKKSKVKVLEASEGMTLERVPG-----------------TLYDPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLNPLE--SDPQNDK--TYLENLEENMSILAEEL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58614 for 2062 contacts (-28.4/contact) +
2D Compatibility (PS) -27480 + (NN) -9640 + (LL) 3640
1D Compatibility (HY) -20800 + (ID) 5800
Total energy: -118694.0 ( -57.56 by residue)
QMean score : 0.499
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