Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRIVDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLHWAQLICYGFMLAEKSDLAEVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYAIWAKASAAWEMKRNKTIQELTFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFYFTAKTITRQVAEDALDEMRRKGLAARSVT---ITAKDKICFLDERKCEPDH--CQFARGYYDRLNEALFDMLQSEEAITR-QVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRFFAEGPGKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDAKNNKRLLNAINVMNKDMIALNKKLKDLDGTIYVQKNELIDWNESVLK--FTFVAKEWLPQNTQSEIQADVLELYFESLRYVAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPIDYYTNLLGGQEDTSRMIFSSPFKQK---NMHLLVADYISTKYQMRENSM-EAVVDALYALVSGENGNYLFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERFQAENVETLIGFCVLGGVFSEGVDLRGNR---LVGAAVVGVGLAQLNHESDLIKDYYNETIGR-GFDYAYQIPGMNKVLQAVGRVIRGESDRGVVLLIEERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS |
3CRV Chain:A ((5-534)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDWQEKLKDKVIEGLRNNFLVALNAPTGSGKTLFSLLVSL----EVKPKVLFVVRTHNEFYPIYRD-LTKIREK----RNITFSFLVGKPSSCLYAEKGAESEDIPCKYCE-----LKGSIVEVKTDDSPLSLVKKLKKDGLQDKFCPYYSLLNSLYKADVIALTYPYFF--IDRYREFIDIDLREYMIVIDEAHNL-DKVNELEERSLSEITIQMAIKQSKSEESRRILSKLLNQLREVVLPDEKYIKVENVPKLSKEEL-----EILADDYEDIRKDSLKQGKVNKIHIGSILRFFSLL---SIGSFIPFSYSKRLVIKNPEISYYLNLLNDNEL---------SIILMSGTLPPREYMEKVWGIKRNMLYLDVEREIQKRVSGSYECYIGVDVTSKYDMRSDNMWKRYADYLLKIYFQAKANVLVVFPSYEIMDRVMS---------RISLPKYVESEDSSVEDLYSAISANNKVLIG-SVGKGKLAEGIELRNNDRSLISDVVIVGIPYPPPDDYLKILAQRVSLKMNRENEEFLFKIPALVTIKQAIGRAIRDVNDKCNVWLLDKRFES---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243254 for 4140 contacts (-58.8/contact) +
2D Compatibility (PS) -53431 + (NN) -7444 + (LL) 20536
1D Compatibility (HY) -37200 + (ID) 5750
Total energy: -326543.0 ( -78.88 by residue)
QMean score : 0.294
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