Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPVRKGKIIDLCSGNGIIPL-LLSTRTEAQIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRIDKEANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKEILYGESE |
| 4DCM Chain:A ((223-321)) | -----------------------------------------------EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM-PEALDRCEFMINNALSGVEPFRFNAVLCNPPF-------DNVAWEMFHHAR-------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26878 for 671 contacts (-40.1/contact) +
2D Compatibility (PS) -9676 + (NN) -4425 + (LL) 12152
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -34227.0 ( -51.01 by residue)
QMean score : 0.462
|
|
|