Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSTGMVRKIDELGRVVIPIEIRRTMNLNVKDPLEIFTDEDAIILKKYSAGLVCDVTGEFSVDNKKFVDGKLTLSKEGAAALMEEIKRRFGDTL
2RO4 Chain:A ((1-52))
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNM------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2RO4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13275 for 239 contacts (-55.5/contact) +
2D Compatibility (PS) -5581 + (NN) -693 + (LL) 2732
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -26117.0 ( -109.28 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_2RO4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RO4-query.scw
PDB file :
Tito_Scwrl_2RO4.pdb
: