Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA
3S3O Chain:A ((173-231))
-LNVLTSIAIPK--VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKHSDIK--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3S3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3779 for 316 contacts (-12.0/contact) +
2D Compatibility (PS) -6184 + (NN) -3505 + (LL) 4380
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -12338.0 ( -39.04 by residue)
QMean score : 0.125
(partial model without unconserved sides chains):
PDB file :
Tito_3S3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S3O-query.scw
PDB file :
Tito_Scwrl_3S3O.pdb
: