Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNKKKTIASLIVLSSLASQIALTPISALADTHDTNNIALLQNTNENVPYKYTSTLTFPTLTNQTQEDYKLEIKLALPSGMNYTDLQVSVGGEDITNQVGTTSFDNSTNTVTFKFDKVTSWDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDKAGNKSTSTGSLKPKDISAPVVKAEETEITYSPGSDVTEEQFLTDIHASVTDNYDSTISLTSNFTSAVNLAVSGDYSVNVQATDKAGNVSNTLNVTVHVSTPAPVAGANITVNHLDSNGNKIAESDTLTGVVNSNYQSESKKITGYTLETTPTNATGTFTDTPQTVDYIYKKDTVTPTPITVNPVEPVKPVNPVVNKPVTVKPANDNTNPSTSNSVEKTTYSSLPTTGDTDQSKSSTIFGALLLLISAPLLLFKKK |
| 4L3A Chain:A ((366-423)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSEKTYIENQLVTEATFLSDIHAKTDDG--STV--TSDFADKVDFNTPGTYTVTLQSENNAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13990 for 292 contacts (-47.9/contact) +
2D Compatibility (PS) -6358 + (NN) -2874 + (LL) 17052
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -11020.0 ( -37.74 by residue)
QMean score : 0.547
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